STRINGSTRING
ptprd protein (Ciona intestinalis) - STRING interaction network
"ptprd" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptprdUncharacterized protein (1911 aa)    
Predicted Functional Partners:
ENSCING00000013477
Uncharacterized protein (305 aa)
     
      0.885
ENSCING00000006030
Uncharacterized protein (1200 aa)
     
 
  0.832
ENSCING00000005670
Uncharacterized protein (231 aa)
     
  0.711
fgfr
Fibroblast growth factor receptor precursor ; Receptor for basic fibroblast growth factor (665 aa)
       
  0.705
ENSCING00000013107
Uncharacterized protein (353 aa)
     
 
  0.690
ENSCING00000013105
Uncharacterized protein (326 aa)
     
 
0.684
ENSCING00000007077
Uncharacterized protein (1152 aa)
       
 
0.684
ENSCING00000003255
Uncharacterized protein (440 aa)
     
  0.648
ENSCING00000022729
Uncharacterized protein (508 aa)
     
  0.646
ENSCING00000008550
Uncharacterized protein (467 aa)
     
  0.646
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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