Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC100186950Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like. (398 aa)    
Predicted Functional Partners:
F6SUS9_CIOIN
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.999
F6PL95_CIOIN
Uncharacterized protein.
  
 0.982
F6UHA9_CIOIN
2-oxogl_dehyd_N domain-containing protein.
  
 0.977
F6ZF70_CIOIN
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.977
LOC100184016
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.976
LOC100186938
Cytoplasmic aconitate hydratase; Belongs to the aconitase/IPM isomerase family.
  
 0.975
F6YNQ3_CIOIN
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
  
 
0.903
F6S7U7_CIOIN
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.878
F6XHC0_CIOIN
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.878
LOC100179315
Aspartate aminotransferase.
   
 0.877
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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