Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F7AM82_CIOINUncharacterized protein. (212 aa)    
Predicted Functional Partners:
F6PKF9_CIOIN
FERM domain-containing protein.
 
      0.890
F6TJI3_CIOIN
FERM domain-containing protein.
 
      0.881
F6U922_CIOIN
FERM domain-containing protein.
 
      0.601
F7A4A9_CIOIN
FERM domain-containing protein.
 
      0.600
F6VDC4_CIOIN
Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.502
F7A4P8_CIOIN
Uncharacterized protein.
      
 0.483
F6TLX0_CIOIN
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 0.452
H2XX02_CIOIN
Ig-like domain-containing protein.
   
 0.452
F6UN86_CIOIN
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.447
gla1
Uncharacterized protein LOC780869.
    
 0.447
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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