STRINGSTRING
ENSCING00000007606 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000007606" - Peptidyl-prolyl cis-trans isomerase in Ciona intestinalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000007606Peptidyl-prolyl cis-trans isomerase ; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (161 aa)    
Predicted Functional Partners:
ENSCING00000009100
Uncharacterized protein (317 aa)
     
      0.888
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
     
  0.856
ENSCING00000008407
Uncharacterized protein (534 aa)
     
  0.775
ENSCING00000022254
Uncharacterized protein (99 aa)
     
  0.749
r27a
R27a protein (155 aa)
     
  0.740
prpf19
Uncharacterized protein (437 aa)
     
  0.718
Cin.19146
Uncharacterized protein ; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (161 aa)
     
  0.698
ENSCING00000001601
Uncharacterized protein (144 aa)
     
  0.687
ENSCING00000003017
Uncharacterized protein (240 aa)
     
  0.687
ENSCING00000008364
Aspartate aminotransferase (415 aa)
       
 
  0.680
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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