STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100176092Cathepsin L1-like isoform X3; Belongs to the peptidase C1 family. (327 aa)    
Predicted Functional Partners:
H2XP77_CIOIN
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
  
 0.971
LOC100186909
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.948
H2Y0H5_CIOIN
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
 
 
 0.948
F6Z3D0_CIOIN
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.946
LOC104266675
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
  
0.945
F6WXG6_CIOIN
Uncharacterized protein; Belongs to the peptidase C1 family.
  
 
0.922
LOC100183589
Uncharacterized protein; Belongs to the peptidase S10 family.
   
 0.911
LOC100179909
Uncharacterized protein; Belongs to the peptidase C1 family.
  
  
 
0.903
LOC100187119
Uncharacterized protein; Belongs to the peptidase C1 family.
  
 
 
0.902
H2XSF5_CIOIN
Sulfatase domain-containing protein.
   
 
 0.503
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.