STRINGSTRING
eef1a1 protein (Ciona intestinalis) - STRING interaction network
"eef1a1" - Elongation factor 1-alpha in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eef1a1Elongation factor 1-alpha ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (469 aa)    
Predicted Functional Partners:
ENSCING00000002308
Uncharacterized protein (414 aa)
     
  0.996
ENSCING00000008014
Uncharacterized protein (281 aa)
     
  0.974
ENSCING00000012701
Uncharacterized protein (74 aa)
     
  0.974
rpl3
Uncharacterized protein (411 aa)
     
  0.960
ENSCING00000012434
Uncharacterized protein (225 aa)
     
  0.958
ENSCING00000003028
Uncharacterized protein (187 aa)
     
  0.951
ENSCING00000008660
Uncharacterized protein (117 aa)
 
  0.944
ENSCING00000009356
Uncharacterized protein (836 aa)
   
  0.927
ENSCING00000009372
Uncharacterized protein (973 aa)
   
  0.927
ENSCING00000021937
Uncharacterized protein (333 aa)
   
  0.927
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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