STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100175495Phospholipase ABHD3. (378 aa)    
Predicted Functional Partners:
F6XPI8_CIOIN
Abhydrolase_2 domain-containing protein.
     
 0.607
F6U857_CIOIN
Uncharacterized protein.
      
 0.530
F6V377_CIOIN
Lipase_GDSL domain-containing protein.
      
 0.519
F6RXS5_CIOIN
AB hydrolase-1 domain-containing protein.
   
 
 0.508
F6X2L1_CIOIN
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
      
 0.474
F6Y7L6_CIOIN
Uncharacterized protein.
   
  
 0.461
adh3
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
 0.448
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.