STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6XU54_CIOINMetallophos domain-containing protein. (252 aa)    
Predicted Functional Partners:
F6WNP9_CIOIN
NAD(P)-bd_dom domain-containing protein.
     
  0.910
F7BP82_CIOIN
Uncharacterized protein; Belongs to the histidine acid phosphatase family.
     
 0.907
F6UJL9_CIOIN
Tartrate-resistant acid phosphatase type 5.
  
  
 
0.905
LOC100184095
Low molecular weight phosphotyrosine protein phosphatase 1-like.
     
 0.904
LOC100179492
FAD synthase.
    
  0.901
F6XHJ8_CIOIN
NUC domain-containing protein.
    
  0.900
LOC100177271
Uncharacterized protein.
   
 0.623
rcc1
Regulator of chromosome condensation.
      
 0.540
F6UET6_CIOIN
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.515
LOC100181174
Uncharacterized protein.
    
  0.459
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.