STRINGSTRING
ddx19b protein (Ciona intestinalis) - STRING interaction network
"ddx19b" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddx19bUncharacterized protein (484 aa)    
Predicted Functional Partners:
ENSCING00000020746
Uncharacterized protein (181 aa)
     
  0.978
ENSCING00000014720
Uncharacterized protein (610 aa)
     
 
  0.926
xpo1
Uncharacterized protein (1071 aa)
     
 
  0.873
ENSCING00000007054
Uncharacterized protein (428 aa)
     
 
  0.804
ENSCING00000013568
Uncharacterized protein (260 aa)
     
 
  0.802
ENSCING00000000337
Uncharacterized protein (1164 aa)
     
 
  0.740
xpo6
Uncharacterized protein (1153 aa)
     
 
  0.740
ENSCING00000005749
Uncharacterized protein (251 aa)
   
   
  0.720
ENSCING00000012860
Uncharacterized protein (497 aa)
     
 
  0.702
ENSCING00000006652
Uncharacterized protein (954 aa)
     
 
  0.702
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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