STRINGSTRING
sp4 protein (Ciona intestinalis) - STRING interaction network
"sp4" - Sp4 protein precursor in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sp4Sp4 protein precursor (978 aa)    
Predicted Functional Partners:
fras1
Uncharacterized protein (3955 aa)
     
  0.785
ENSCING00000019051
Uncharacterized protein (411 aa)
     
  0.692
not2
Not2 protein precursor (412 aa)
     
  0.692
ENSCING00000019069
Uncharacterized protein (375 aa)
     
  0.692
ENSCING00000019540
Uncharacterized protein (372 aa)
     
  0.692
ENSCING00000013191
Uncharacterized protein (408 aa)
     
  0.692
ENSCING00000009089
Uncharacterized protein (400 aa)
     
  0.692
ENSCING00000007413
Uncharacterized protein (409 aa)
     
  0.692
ENSCING00000003087
Uncharacterized protein (147 aa)
     
  0.692
ENSCING00000000760
Uncharacterized protein (416 aa)
     
  0.692
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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