STRINGSTRING
Cin.27705 protein (Ciona intestinalis) - STRING interaction network
"Cin.27705" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.27705Uncharacterized protein (413 aa)    
Predicted Functional Partners:
prpf19
Uncharacterized protein (437 aa)
     
  0.872
ENSCING00000022206
Uncharacterized protein (486 aa)
     
  0.858
cdc40
Uncharacterized protein (504 aa)
     
  0.841
ENSCING00000001601
Uncharacterized protein (144 aa)
       
  0.825
ENSCING00000024924
Uncharacterized protein (112 aa)
     
  0.818
snrnp200
Uncharacterized protein (2140 aa)
     
  0.818
ddx5
Uncharacterized protein (572 aa)
     
  0.798
ENSCING00000008407
Uncharacterized protein (534 aa)
     
  0.797
eif4a3
Uncharacterized protein (410 aa)
     
  0.795
ENSCING00000010780
Uncharacterized protein (430 aa)
     
  0.795
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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