STRINGSTRING
ENSCING00000007814 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000007814" - Phosphoserine aminotransferase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000007814Phosphoserine aminotransferase (386 aa)    
Predicted Functional Partners:
ENSCING00000022897
Uncharacterized protein (526 aa)
   
  0.999
ENSCING00000009756
Uncharacterized protein (243 aa)
   
 
  0.980
ENSCING00000018576
Uncharacterized protein (336 aa)
   
  0.916
ctbp1
Uncharacterized protein (442 aa)
   
  0.916
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
   
  0.817
ENSCING00000009202
Uncharacterized protein (489 aa)
   
   
  0.682
ENSCING00000002572
Uncharacterized protein (731 aa)
     
   
  0.667
ENSCING00000005769
Uncharacterized protein (253 aa)
   
   
  0.648
dpyd
Uncharacterized protein (1024 aa)
   
   
  0.612
ENSCING00000005921
Uncharacterized protein (999 aa)
   
 
  0.587
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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