Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F6WTL7_CIOINCollagen IV NC1 domain-containing protein. (1771 aa)    
Predicted Functional Partners:
Fcol1
Fibrillar collagen NC1 domain-containing protein.
  
  
 
0.916
LOC100185145
Collagen IV NC1 domain-containing protein.
  
  
 
0.907
F6ZJS3_CIOIN
Uncharacterized protein.
     
  0.900
H2XPS3_CIOIN
Uncharacterized protein.
     
  0.900
H2XS71_CIOIN
Uncharacterized protein.
     
  0.900
H2Y2J0_CIOIN
Uncharacterized protein.
     
  0.900
LOC100178689
VWFA domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.733
F6T2X8_CIOIN
Integrin_alpha2 domain-containing protein.
     
  0.674
F6RGM5_CIOIN
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
     
  0.674
H2XPX7_CIOIN
Integrin_alpha2 domain-containing protein.
     
  0.674
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.