STRINGSTRING
ci-rsp4/6 protein (Ciona intestinalis) - STRING interaction network
"ci-rsp4/6" - Uncharacterized protein LOC100180393 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ci-rsp4/6Uncharacterized protein LOC100180393 (527 aa)    
Predicted Functional Partners:
rsp3
Radial spoke 3 protein (322 aa)
     
 
  0.699
ci-rsp9
Uncharacterized protein LOC100179789 (276 aa)
     
   
  0.603
ccdc39
Uncharacterized protein (238 aa)
     
   
  0.515
ci-morn40
Uncharacterized protein LOC100177304 (300 aa)
     
   
  0.515
Cin.13544
Uncharacterized protein (239 aa)
     
   
  0.514
ciic3
Thioredoxin domain-containing protein 3 homolog ; May be required during the final stages of sperm tail maturation. May act by reducing disulfide bonds within the sperm components (By similarity) (653 aa)
     
   
  0.508
ENSCING00000008117
Uncharacterized protein (348 aa)
     
   
  0.503
ENSCING00000024059
Uncharacterized protein (507 aa)
     
   
  0.482
ccdc40
Uncharacterized protein (864 aa)
     
   
  0.472
ENSCING00000004270
Uncharacterized protein (679 aa)
     
   
  0.459
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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