STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ci-rsp4/6Radial spoke protein RSP4/6. (527 aa)    
Predicted Functional Partners:
ci-rsp9
Radial spoke protein Ci-RSP9.
   
 0.937
ci-morn40
Radial spoke protein MORN40.
   
 
 0.902
L7N0T0_CIOIN
RanBD1 domain-containing protein.
   
 
 0.862
Rsp3
Uncharacterized protein.
   
 
 0.783
LOC778840
WD_REPEATS_REGION domain-containing protein.
   
  
 0.750
LOC100186420
Dynein regulatory complex subunit 3-like.
   
  
 0.716
F7A6B8_CIOIN
Uncharacterized protein.
    
 0.685
H2XRV2_CIOIN
Uncharacterized protein.
    
 0.685
LOC100183643
Uncharacterized protein.
   
  
 0.644
Ic1
Uncharacterized protein.
   
  
 0.609
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.