STRINGSTRING
ENSCING00000007871 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000007871" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000007871Uncharacterized protein (127 aa)    
Predicted Functional Partners:
rbdlc
Roadblock-related dynein light chain (96 aa)
     
  0.602
ENSCING00000012105
Uncharacterized protein (348 aa)
     
 
  0.583
ENSCING00000018420
Uncharacterized protein (215 aa)
     
  0.583
dynll6
Dynein light chain 6 (89 aa)
     
 
  0.583
ENSCING00000004337
Uncharacterized protein (528 aa)
     
  0.576
dynlt1
Dynein, light chain, Tctex-type 1 (113 aa)
     
0.573
ENSCING00000020273
Uncharacterized protein (89 aa)
     
 
  0.565
ENSCING00000006086
Uncharacterized protein (315 aa)
     
 
  0.565
ENSCING00000022961
Uncharacterized protein (257 aa)
     
 
  0.552
wdr78
Uncharacterized protein (778 aa)
     
 
  0.544
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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