STRINGSTRING
cpsf2 protein (Ciona intestinalis) - STRING interaction network
"cpsf2" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpsf2Uncharacterized protein (784 aa)    
Predicted Functional Partners:
ENSCING00000000514
Uncharacterized protein (1354 aa)
     
  0.998
ENSCING00000021080
Uncharacterized protein (262 aa)
     
  0.998
ENSCING00000006722
Uncharacterized protein (753 aa)
     
  0.997
ENSCING00000003483
Uncharacterized protein (511 aa)
     
  0.997
cpsf3
Uncharacterized protein (695 aa)
     
0.996
ENSCING00000009100
Uncharacterized protein (317 aa)
     
  0.994
papolg
Uncharacterized protein (536 aa)
     
  0.992
cstf1
Uncharacterized protein (435 aa)
     
  0.991
ENSCING00000017649
Uncharacterized protein (486 aa)
     
  0.987
ENSCING00000020318
Ziinc finger protein Ci-ZF(C3H)-7 (977 aa)
     
  0.982
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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