STRINGSTRING
ENSCING00000007884 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000007884" - DNA-directed RNA polymerase in Ciona intestinalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000007884DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1814 aa)    
Predicted Functional Partners:
polr2b
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1183 aa)
   
  0.999
polr3b
DNA-directed RNA polymerase (275 aa)
   
  0.998
ENSCING00000022904
Uncharacterized protein (135 aa)
   
  0.997
ENSCING00000018498
Uncharacterized protein (178 aa)
   
  0.997
ENSCING00000023381
DNA-directed RNA polymerase (205 aa)
   
  0.997
ENSCING00000021895
Uncharacterized protein (286 aa)
   
  0.996
ENSCING00000003329
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1141 aa)
   
  0.995
ENSCING00000024933
Uncharacterized protein (211 aa)
   
  0.995
ENSCING00000019359
Uncharacterized protein (141 aa)
   
  0.993
ENSCING00000020531
Uncharacterized protein (117 aa)
   
  0.991
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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