STRINGSTRING
LOC494371 protein (Ciona intestinalis) - STRING interaction network
"LOC494371" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC494371Uncharacterized protein (1167 aa)    
Predicted Functional Partners:
ENSCING00000010041
Uncharacterized protein (729 aa)
           
  0.493
ENSCING00000004538
Uncharacterized protein (2683 aa)
     
   
  0.484
ENSCING00000014032
Uncharacterized protein (435 aa)
           
  0.441
ENSCING00000014627
Uncharacterized protein (215 aa)
           
  0.437
ENSCING00000024542
Uncharacterized protein (217 aa)
     
   
  0.434
ENSCING00000012089
Uncharacterized protein (205 aa)
       
 
  0.432
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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