STRINGSTRING
ENSCING00000007894 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000007894" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000007894Uncharacterized protein (300 aa)    
Predicted Functional Partners:
ENSCING00000023847
Uncharacterized protein (319 aa)
   
 
0.956
polr2b
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1183 aa)
     
 
  0.694
ENSCING00000014822
Uncharacterized protein (442 aa)
     
      0.657
ENSCING00000004177
Uncharacterized protein (162 aa)
     
      0.657
ENSCING00000020531
Uncharacterized protein (117 aa)
     
 
  0.640
ENSCING00000004658
Uncharacterized protein (467 aa)
   
      0.402
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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