STRINGSTRING
Cin.21140 protein (Ciona intestinalis) - STRING interaction network
"Cin.21140" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.21140Uncharacterized protein (275 aa)    
Predicted Functional Partners:
ENSCING00000002850
Uncharacterized protein (2241 aa)
   
  0.970
ENSCING00000009957
Uncharacterized protein (87 aa)
       
  0.961
ENSCING00000020502
Zinc finger protein (579 aa)
     
  0.929
ENSCING00000005522
Uncharacterized protein (720 aa)
   
  0.929
ENSCING00000014779
Uncharacterized protein (339 aa)
     
  0.878
ENSCING00000023687
Uncharacterized protein (820 aa)
   
  0.862
ENSCING00000007470
Uncharacterized protein (478 aa)
       
0.858
zf(zz)-7
Uncharacterized protein; Zinc finger protein (619 aa)
   
  0.830
ENSCING00000008035
Zinc finger protein Ci-ZF(ZZ/RING)-1 (778 aa)
       
  0.829
ENSCING00000022720
Uncharacterized protein (213 aa)
       
  0.815
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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