F6ZRP3_CIOIN protein (Ciona intestinalis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

F6ZRP3_CIOIN

Uncharacterized protein. (655 aa)

Predicted Functional Partners:

F7A9D2_CIOIN

0.900

H2XV01_CIOIN

0.832

H2XYT0_CIOIN

0.559

F6PIT9_CIOIN

0.491

F6X3A0_CIOIN

0.470

H2XLM3_CIOIN

0.468

H2XZU0_CIOIN

0.436

H2XZ41_CIOIN

0.435

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PIT9_CIOIN	F6ZRP3_CIOIN	ENSCINP00000020211	ENSCINP00000016246	Uncharacterized protein.	Uncharacterized protein.	0.491
F6PIT9_CIOIN	F7A9D2_CIOIN	ENSCINP00000020211	ENSCINP00000023644	Uncharacterized protein.	Uncharacterized protein.	0.491
F6X3A0_CIOIN	F6ZRP3_CIOIN	ENSCINP00000015976	ENSCINP00000016246	CS domain-containing protein.	Uncharacterized protein.	0.470
F6X3A0_CIOIN	F7A9D2_CIOIN	ENSCINP00000015976	ENSCINP00000023644	CS domain-containing protein.	Uncharacterized protein.	0.470
F6ZRP3_CIOIN	F6PIT9_CIOIN	ENSCINP00000016246	ENSCINP00000020211	Uncharacterized protein.	Uncharacterized protein.	0.491
F6ZRP3_CIOIN	F6X3A0_CIOIN	ENSCINP00000016246	ENSCINP00000015976	Uncharacterized protein.	CS domain-containing protein.	0.470
F6ZRP3_CIOIN	F7A9D2_CIOIN	ENSCINP00000016246	ENSCINP00000023644	Uncharacterized protein.	Uncharacterized protein.	0.900
F6ZRP3_CIOIN	H2XLM3_CIOIN	ENSCINP00000016246	ENSCINP00000030555	Uncharacterized protein.	Uncharacterized protein.	0.468
F6ZRP3_CIOIN	H2XV01_CIOIN	ENSCINP00000016246	ENSCINP00000033485	Uncharacterized protein.	Uncharacterized protein.	0.832
F6ZRP3_CIOIN	H2XYT0_CIOIN	ENSCINP00000016246	ENSCINP00000034814	Uncharacterized protein.	Uncharacterized protein.	0.559
F6ZRP3_CIOIN	H2XZ41_CIOIN	ENSCINP00000016246	ENSCINP00000034925	Uncharacterized protein.	Uncharacterized protein.	0.435
F6ZRP3_CIOIN	H2XZU0_CIOIN	ENSCINP00000016246	ENSCINP00000035174	Uncharacterized protein.	EGF-like domain-containing protein.	0.436
F7A9D2_CIOIN	F6PIT9_CIOIN	ENSCINP00000023644	ENSCINP00000020211	Uncharacterized protein.	Uncharacterized protein.	0.491
F7A9D2_CIOIN	F6X3A0_CIOIN	ENSCINP00000023644	ENSCINP00000015976	Uncharacterized protein.	CS domain-containing protein.	0.470
F7A9D2_CIOIN	F6ZRP3_CIOIN	ENSCINP00000023644	ENSCINP00000016246	Uncharacterized protein.	Uncharacterized protein.	0.900
F7A9D2_CIOIN	H2XLM3_CIOIN	ENSCINP00000023644	ENSCINP00000030555	Uncharacterized protein.	Uncharacterized protein.	0.468
F7A9D2_CIOIN	H2XYT0_CIOIN	ENSCINP00000023644	ENSCINP00000034814	Uncharacterized protein.	Uncharacterized protein.	0.559
H2XLM3_CIOIN	F6ZRP3_CIOIN	ENSCINP00000030555	ENSCINP00000016246	Uncharacterized protein.	Uncharacterized protein.	0.468
H2XLM3_CIOIN	F7A9D2_CIOIN	ENSCINP00000030555	ENSCINP00000023644	Uncharacterized protein.	Uncharacterized protein.	0.468
H2XLM3_CIOIN	H2XYT0_CIOIN	ENSCINP00000030555	ENSCINP00000034814	Uncharacterized protein.	Uncharacterized protein.	0.928