STRINGSTRING
tpp2 protein (Ciona intestinalis) - STRING interaction network
"tpp2" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpp2Uncharacterized protein (1270 aa)    
Predicted Functional Partners:
ENSCING00000006286
Uncharacterized protein ; Component of the post-replicative DNA mismatch repair system (MMR) (943 aa)
     
 
  0.596
ENSCING00000005522
Uncharacterized protein (720 aa)
   
  0.593
ENSCING00000002277
Uncharacterized protein (972 aa)
     
      0.584
ENSCING00000016251
Uncharacterized protein (295 aa)
       
      0.561
ENSCING00000007699
Uncharacterized protein (983 aa)
         
  0.537
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
   
  0.502
dnajc10
Uncharacterized protein (817 aa)
   
 
  0.498
ENSCING00000009202
Uncharacterized protein (489 aa)
         
  0.489
ENSCING00000011483
Uncharacterized protein (310 aa)
     
  0.488
ENSCING00000022395
Uncharacterized protein (417 aa)
     
    0.487
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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