Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
F6ZRC6_CIOINAldo_ket_red domain-containing protein. (317 aa)    
Predicted Functional Partners:
LOC100184593
Sorbitol dehydrogenase.
  
 0.926
F6Q7A6_CIOIN
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.925
LOC100184485
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 0.925
H2XY01_CIOIN
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.925
LOC100182755
Aldehyde dehydrogenase family 16 member A1-like; Belongs to the aldehyde dehydrogenase family.
   
 
 0.924
LOC100175137
Dihydropteridine reductase isoform X2.
   
 0.922
LOC100182286
Carbonyl reductase [NADPH] 1-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.921
LOC100177275
PKS_ER domain-containing protein.
  
 0.919
LOC100186038
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase-like.
  
 
 0.917
LOC100175707
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 
 0.917
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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