Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F6W4K8_CIOINUncharacterized protein. (835 aa)    
Predicted Functional Partners:
H2Y004_CIOIN
PBPe domain-containing protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
  
 
0.946
LOC100184418
Uncharacterized protein.
   
0.925
H2XLW2_CIOIN
Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
  
 
0.910
F6X3Y8_CIOIN
Uncharacterized protein.
  
  
 
0.906
F6UM48_CIOIN
Uncharacterized protein.
    
   0.875
F6PLQ2_CIOIN
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.839
H2XK53_CIOIN
Uncharacterized protein.
    
 
 0.838
LOC100176359
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
      
 0.817
F6YFX5_CIOIN
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.812
ciad70l24
Cannabinoid receptor isoform X1; Belongs to the G-protein coupled receptor 1 family.
      
 0.710
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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