Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC1001788413-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (443 aa)    
Predicted Functional Partners:
LOC100178149
PKS_AT domain-containing protein.
 
 0.997
LOC100181042
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.985
LOC100184861
Estradiol 17-beta-dehydrogenase 8-like.
 
 0.949
H2Y3E5_CIOIN
Uncharacterized protein.
  
 
0.924
F6SPL5_CIOIN
Elongation of very long chain fatty acids protein.
     
 0.917
LOC100182900
Elongation of very long chain fatty acids protein.
     
 0.917
F6VMC6_CIOIN
BPL/LPL catalytic domain-containing protein.
    
 0.852
H2XLH0_CIOIN
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
    
 0.834
LOC100178663
28S ribosomal protein S2, mitochondrial-like.
   
 
 0.758
F6T0F1_CIOIN
Uncharacterized protein.
  
  
 0.753
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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