Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100183164Uncharacterized protein. (474 aa)    
Predicted Functional Partners:
LOC100178763
Glyoxylate reductase/hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 
 0.954
LOC100177203
Alpha-enolase-like.
    
 0.933
F6V8G3_CIOIN
Enolase_C domain-containing protein.
    
 0.933
LOC100176359
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
     
 0.918
F6Q7A6_CIOIN
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.916
H2XY01_CIOIN
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.916
LOC100182755
Aldehyde dehydrogenase family 16 member A1-like; Belongs to the aldehyde dehydrogenase family.
   
 
 0.911
LOC100175707
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
     
 0.911
LOC100184485
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
     
 0.911
LOC100183764
Aldehyde dehydrogenase, mitochondrial; Belongs to the aldehyde dehydrogenase family.
     
 0.911
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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