STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6S5E1_CIOINUncharacterized protein. (221 aa)    
Predicted Functional Partners:
F6SAN3_CIOIN
Phosphoinositide phospholipase C.
 
  
  0.993
LOC100185660
Phosphoinositide phospholipase C.
  
  
 
0.927
F6RJ12_CIOIN
Kinase; Belongs to the inositol phosphokinase (IPK) family.
     
 0.920
LOC100182810
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4-like.
 
     0.920
F6QX80_CIOIN
DAGKc domain-containing protein.
     
 0.912
F6PQJ9_CIOIN
PIPK domain-containing protein.
     
 0.911
LOC100178482
Uncharacterized protein.
   
 
 0.911
F6W6I5_CIOIN
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.908
F6WMZ2_CIOIN
PIPK domain-containing protein.
     
 0.907
LOC100180551
Inositol-1-monophosphatase.
     
 0.906
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.