STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6Z6K5_CIOINSuppressor of fused homolog. (473 aa)    
Predicted Functional Partners:
Gli
Uncharacterized protein.
    
 0.937
F7B0W3_CIOIN
Protein kinase domain-containing protein.
    
 0.937
Zf(c2h2)-126
Uncharacterized protein.
    
 0.914
Smoothened
Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.797
F7AKB5_CIOIN
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
     
 0.791
LOC100176009
cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.
    
 0.765
gsk
Glycogen synthase kinase Alpha/beta.
    
 0.717
F6ZAP9_CIOIN
Uncharacterized protein.
 
   
 0.701
H2Y2W2_CIOIN
SSD domain-containing protein.
    
 
 0.691
LOC100181294
Uncharacterized protein.
     
 0.685
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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