STRINGSTRING
ENSCING00000008108 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000008108" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000008108Uncharacterized protein (155 aa)    
Predicted Functional Partners:
ENSCING00000009858
Uncharacterized protein (205 aa)
   
  0.896
ENSCING00000014118
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (262 aa)
     
  0.870
ENSCING00000002329
Uncharacterized protein (387 aa)
     
  0.848
ENSCING00000022233
Uncharacterized protein (107 aa)
       
      0.830
ENSCING00000001695
Uncharacterized protein (264 aa)
     
        0.750
ENSCING00000002177
Uncharacterized protein (324 aa)
     
      0.698
ENSCING00000018708
Uncharacterized protein (1528 aa)
   
  0.683
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
  0.660
ENSCING00000012967
Uncharacterized protein ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (427 aa)
     
        0.655
ENSCING00000017363
Uncharacterized protein (456 aa)
     
        0.653
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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