STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100184175GT23 domain-containing protein; Belongs to the glycosyltransferase 23 family. (558 aa)    
Predicted Functional Partners:
F6RMI2_CIOIN
Alpha-mannosidase.
    
 0.912
H2XN21_CIOIN
Uncharacterized protein.
     
 0.908
LOC100187449
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A isoform X1.
     
 0.658
LOC100181865
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A-like.
     
 0.658
F6ZPY6_CIOIN
Uncharacterized protein.
     
 0.657
F6X2H2_CIOIN
Uncharacterized protein.
     
 0.657
LOC100185960
Beta-1,4-galactosyltransferase 1.
     
 0.657
F7AB40_CIOIN
Uncharacterized protein.
     
 0.657
F7A738_CIOIN
Uncharacterized protein.
     
 0.657
F6XTL0_CIOIN
Uncharacterized protein.
     
 0.657
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.