usf protein (Ciona intestinalis) - STRING interaction network

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[Homology]

Score

usf

Transcription factor protein. (325 aa)

Predicted Functional Partners:

F6R7T5_CIOIN

0.801

F6QNK0_CIOIN

0.741

LOC100178867

0.654

zf(c2h2)-84

0.629

H2Y0R6_CIOIN

0.586

H2Y2G5_CIOIN

0.586

F7B1X4_CIOIN

0.584

Gli

0.560

Uhrf2

0.548

LOC100175883

0.518

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6QNK0_CIOIN	usf	ENSCINP00000009720	ENSCINP00000016663	TAF domain-containing protein.	Transcription factor protein.	0.741
F6R7T5_CIOIN	F7B1X4_CIOIN	ENSCINP00000018331	ENSCINP00000012774	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.697
F6R7T5_CIOIN	Gli	ENSCINP00000018331	ENSCINP00000022660	Uncharacterized protein.	Uncharacterized protein.	0.758
F6R7T5_CIOIN	H2Y0R6_CIOIN	ENSCINP00000018331	ENSCINP00000035500	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.655
F6R7T5_CIOIN	H2Y2G5_CIOIN	ENSCINP00000018331	ENSCINP00000036100	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.655
F6R7T5_CIOIN	usf	ENSCINP00000018331	ENSCINP00000016663	Uncharacterized protein.	Transcription factor protein.	0.801
F7B1X4_CIOIN	F6R7T5_CIOIN	ENSCINP00000012774	ENSCINP00000018331	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.697
F7B1X4_CIOIN	Uhrf2	ENSCINP00000012774	ENSCINP00000033311	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.725
F7B1X4_CIOIN	usf	ENSCINP00000012774	ENSCINP00000016663	WD_REPEATS_REGION domain-containing protein.	Transcription factor protein.	0.584
Gli	F6R7T5_CIOIN	ENSCINP00000022660	ENSCINP00000018331	Uncharacterized protein.	Uncharacterized protein.	0.758
Gli	usf	ENSCINP00000022660	ENSCINP00000016663	Uncharacterized protein.	Transcription factor protein.	0.560
H2Y0R6_CIOIN	F6R7T5_CIOIN	ENSCINP00000035500	ENSCINP00000018331	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Uncharacterized protein.	0.655
H2Y0R6_CIOIN	H2Y2G5_CIOIN	ENSCINP00000035500	ENSCINP00000036100	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.489
H2Y0R6_CIOIN	usf	ENSCINP00000035500	ENSCINP00000016663	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Transcription factor protein.	0.586
H2Y2G5_CIOIN	F6R7T5_CIOIN	ENSCINP00000036100	ENSCINP00000018331	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Uncharacterized protein.	0.655
H2Y2G5_CIOIN	H2Y0R6_CIOIN	ENSCINP00000036100	ENSCINP00000035500	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.489
H2Y2G5_CIOIN	usf	ENSCINP00000036100	ENSCINP00000016663	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Transcription factor protein.	0.586
LOC100175883	usf	ENSCINP00000015668	ENSCINP00000016663	ETF domain-containing protein.	Transcription factor protein.	0.518
LOC100178867	usf	ENSCINP00000015646	ENSCINP00000016663	Mitochondrial import receptor subunit TOM40 homolog isoform X1.	Transcription factor protein.	0.654
Uhrf2	F7B1X4_CIOIN	ENSCINP00000033311	ENSCINP00000012774	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.725