STRINGSTRING
zf(fyve)-4 protein (Ciona intestinalis) - STRING interaction network
"zf(fyve)-4" - Zinc finger protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zf(fyve)-4Zinc finger protein (893 aa)    
Predicted Functional Partners:
rhou
Wrch protein (259 aa)
       
  0.643
rcl1
Rac and Cdc42-like 1 protein (194 aa)
       
  0.643
LOC445702
Rac1 protein (192 aa)
       
  0.643
LOC445704
TC10 protein (193 aa)
       
  0.640
ENSCING00000000475
Uncharacterized protein (623 aa)
       
  0.634
rhoa
RhoA protein (193 aa)
       
  0.579
rac2
Rac2 protein (192 aa)
       
  0.559
ENSCING00000024904
Uncharacterized protein (116 aa)
       
  0.474
rhob
Rif protein (249 aa)
       
  0.474
rcl2
Rac and Cdc42-like 2 protein (192 aa)
       
  0.474
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (9%) [HD]