Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F6PIZ2_CIOINUncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (250 aa)    
Predicted Functional Partners:
F6U222_CIOIN
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
   
  
 0.904
LOC100181032
SCP2 domain-containing protein.
   
  
 0.798
H2XNI1_CIOIN
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
   
  
 0.755
chat
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
   
  
 0.750
F6S2A1_CIOIN
Uncharacterized protein.
   
  
 0.740
H2XJU8_CIOIN
Uncharacterized protein.
 
    
 0.739
F6WCD3_CIOIN
PNPLA domain-containing protein.
 
      0.736
F6WXR3_CIOIN
Uncharacterized protein.
   
  
 0.663
LOC100187271
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
   
  
 0.642
LOC100187496
Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial-like.
   
  
 0.631
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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