STRINGSTRING
af10-like protein (Ciona intestinalis) - STRING interaction network
"af10-like" - AF10-like protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
af10-likeAF10-like protein (520 aa)    
Predicted Functional Partners:
ENSCING00000009221
Uncharacterized protein (572 aa)
     
  0.679
herc4
Uncharacterized protein (1029 aa)
     
    0.647
ENSCING00000000272
Uncharacterized protein (2337 aa)
     
    0.647
ENSCING00000023681
Uncharacterized protein (256 aa)
     
 
  0.633
ENSCING00000010516
Uncharacterized protein (228 aa)
     
  0.631
ENSCING00000007170
Uncharacterized protein (960 aa)
     
  0.617
ENSCING00000006124
Uncharacterized protein (660 aa)
     
  0.617
ENSCING00000007020
Uncharacterized protein (273 aa)
       
      0.579
CTNNB1
Beta-catenin (497 aa)
       
      0.579
ENSCING00000020611
Uncharacterized protein (377 aa)
           
  0.576
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (12%) [HD]