Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
F7B499_CIOINMethyltransf_11 domain-containing protein. (325 aa)    
Predicted Functional Partners:
NADH1
NADH-ubiquinone oxidoreductase chain 1; Belongs to the complex I subunit 1 family.
     
 0.931
F6R7I5_CIOIN
Uncharacterized protein.
 
 
    0.903
LOC100180370
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4.
   
 
 0.897
LOC100187136
Uncharacterized protein.
    
 0.894
LOC100181925
DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents; Belongs to the RecA family. RAD51 subfamily.
    
   0.894
LOC100183392
Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
   
 
 0.892
LOC100176138
NADH-ubiquinone oxidoreductase 49 kDa subunit-like; Belongs to the complex I 49 kDa subunit family.
    
 0.880
LOC100183052
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial; Belongs to the complex I 30 kDa subunit family.
   
 0.880
LOC100181042
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.857
H2XRW4_CIOIN
Uncharacterized protein.
   
 
 0.855
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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