STRINGSTRING
ENSCING00000008408 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000008408" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000008408Uncharacterized protein (229 aa)    
Predicted Functional Partners:
ENSCING00000010954
Uncharacterized protein (177 aa)
     
      0.590
ENSCING00000001685
Uncharacterized protein (162 aa)
     
 
  0.563
ENSCING00000013487
Uncharacterized protein (464 aa)
     
      0.563
ENSCING00000023103
Uncharacterized protein (137 aa)
           
  0.529
ENSCING00000024656
Uncharacterized protein ; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (285 aa)
       
  0.502
ENSCING00000012017
Zinc finger protein (TRAF/RING)-4 (330 aa)
       
  0.403
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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