STRINGSTRING
gcn1l1 protein (Ciona intestinalis) - STRING interaction network
"gcn1l1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gcn1l1Uncharacterized protein (2637 aa)    
Predicted Functional Partners:
gfpt1
Uncharacterized protein (689 aa)
       
 
  0.856
ENSCING00000023269
Uncharacterized protein (229 aa)
       
 
  0.841
ENSCING00000002308
Uncharacterized protein (414 aa)
     
 
  0.820
ENSCING00000013923
Uncharacterized protein (190 aa)
     
 
  0.813
eif2ak4
Uncharacterized protein (1156 aa)
     
 
  0.811
ENSCING00000009891
Uncharacterized protein (147 aa)
     
 
  0.802
ENSCING00000002406
Uncharacterized protein (364 aa)
     
 
  0.757
cct4
T-complex protein 1 subunit delta ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (540 aa)
     
      0.739
ENSCING00000008657
Uncharacterized protein (513 aa)
     
 
  0.735
ENSCING00000007286
Uncharacterized protein (370 aa)
       
      0.733
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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