STRINGSTRING
ENSCING00000008562 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000008562" - Transforming growth factor beta superfamily signaling ligand precursor in Ciona intestinalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000008562Transforming growth factor beta superfamily signaling ligand precursor (385 aa)    
Predicted Functional Partners:
nodal
Transforming growth factor beta superfamily signaling ligand precursor (415 aa)
         
  0.927
tgfbeta2
Transforming growth factor beta superfamily signaling ligand precursor (435 aa)
         
 
0.917
ENSCING00000024147
Uncharacterized protein (151 aa)
       
  0.822
tgfbr-iia
Transforming growth factor beta receptor precursor (622 aa)
       
  0.822
tgfbr-iib
Transforming growth factor beta receptor precursor (567 aa)
       
  0.822
tgfbr-ib
Transforming growth factor beta receptor (531 aa)
       
  0.807
tgfbr-ic
TGFbeta-recepter I homologue precursor (486 aa)
       
  0.807
tgfbr-ia
Transforming growth factor beta receptor precursor (423 aa)
       
  0.807
smad2/3b
Smad2/3b protein (426 aa)
       
  0.763
noggin
Noggin protein precursor (219 aa)
     
  0.710
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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