Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100181892Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (587 aa)    
Predicted Functional Partners:
LOC100185737
Uncharacterized protein.
      
 0.671
H2XPC5_CIOIN
Ribosomal_L16 domain-containing protein.
      
 0.660
LOC100177090
Ceramide synthase 1-like.
 
      0.656
F6Z6E4_CIOIN
V-SNARE domain-containing protein.
      
 0.515
LOC100180163
post-GPI attachment to proteins factor 2-like.
      
 0.514
Thymosin_beta
Thymosin beta HOMOLOGUE.
      
 0.513
LOC100183841
Uncharacterized protein.
    
   0.513
F7ASV8_CIOIN
RING-type domain-containing protein.
      
 0.510
H2XRS4_CIOIN
Uncharacterized protein.
      
 0.495
LOC100184004
Vesicle transport through interaction with t-SNAREs homolog 1B isoform X1.
      
 0.493
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.