STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tgfbeta2TGF_BETA_2 domain-containing protein. (435 aa)    
Predicted Functional Partners:
Tgfbr-iib
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.998
tgfbr-ic
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.
    
 0.989
Lefty/antivin
TGF_BETA_2 domain-containing protein.
     
0.947
LOC100181891
Uncharacterized protein.
   
  
 0.843
smad4
Mothers against decapentaplegic homolog.
    
 0.796
LOC100186863
PDZ domain-containing protein GIPC1.
     
  0.767
H2XYT5_CIOIN
Uncharacterized protein.
    
 0.766
Fgf11/12/13/14
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
  
   
 0.702
fgf4/5/6
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.693
fgf3/7/10/22
Fibroblast growth factor 3/7/10/22; Belongs to the heparin-binding growth factors family.
      
 0.693
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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