F6X0G2_CIOIN protein (Ciona intestinalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

F6X0G2_CIOIN

Uncharacterized protein. (557 aa)

Predicted Functional Partners:

LOC100182614

0.624

F6XNK4_CIOIN

0.585

H2XKL0_CIOIN

0.553

F6QGV6_CIOIN

0.550

F6ZU53_CIOIN

0.539

H2XKP7_CIOIN

0.523

F6YYY1_CIOIN

0.466

H2XWF3_CIOIN

0.420

H2XKK7_CIOIN

0.416

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6QGV6_CIOIN	F6X0G2_CIOIN	ENSCINP00000016928	ENSCINP00000017487	Uncharacterized protein.	Uncharacterized protein.	0.550
F6QGV6_CIOIN	F6XNK4_CIOIN	ENSCINP00000016928	ENSCINP00000024877	Uncharacterized protein.	Uncharacterized protein.	0.726
F6QGV6_CIOIN	F6YYY1_CIOIN	ENSCINP00000016928	ENSCINP00000012252	Uncharacterized protein.	Uncharacterized protein.	0.963
F6QGV6_CIOIN	F6ZU53_CIOIN	ENSCINP00000016928	ENSCINP00000021895	Uncharacterized protein.	Uncharacterized protein.	0.762
F6QGV6_CIOIN	H2XKK7_CIOIN	ENSCINP00000016928	ENSCINP00000030189	Uncharacterized protein.	Uncharacterized protein.	0.627
F6QGV6_CIOIN	H2XKL0_CIOIN	ENSCINP00000016928	ENSCINP00000030192	Uncharacterized protein.	Uncharacterized protein.	0.565
F6QGV6_CIOIN	H2XKP7_CIOIN	ENSCINP00000016928	ENSCINP00000030229	Uncharacterized protein.	Uncharacterized protein.	0.468
F6QGV6_CIOIN	LOC100182614	ENSCINP00000016928	ENSCINP00000031080	Uncharacterized protein.	Zinc transporter ZIP11.	0.713
F6X0G2_CIOIN	F6QGV6_CIOIN	ENSCINP00000017487	ENSCINP00000016928	Uncharacterized protein.	Uncharacterized protein.	0.550
F6X0G2_CIOIN	F6XNK4_CIOIN	ENSCINP00000017487	ENSCINP00000024877	Uncharacterized protein.	Uncharacterized protein.	0.585
F6X0G2_CIOIN	F6YYY1_CIOIN	ENSCINP00000017487	ENSCINP00000012252	Uncharacterized protein.	Uncharacterized protein.	0.466
F6X0G2_CIOIN	F6ZU53_CIOIN	ENSCINP00000017487	ENSCINP00000021895	Uncharacterized protein.	Uncharacterized protein.	0.539
F6X0G2_CIOIN	H2XKK7_CIOIN	ENSCINP00000017487	ENSCINP00000030189	Uncharacterized protein.	Uncharacterized protein.	0.416
F6X0G2_CIOIN	H2XKL0_CIOIN	ENSCINP00000017487	ENSCINP00000030192	Uncharacterized protein.	Uncharacterized protein.	0.553
F6X0G2_CIOIN	H2XKP7_CIOIN	ENSCINP00000017487	ENSCINP00000030229	Uncharacterized protein.	Uncharacterized protein.	0.523
F6X0G2_CIOIN	H2XWF3_CIOIN	ENSCINP00000017487	ENSCINP00000033987	Uncharacterized protein.	MFS domain-containing protein.	0.420
F6X0G2_CIOIN	LOC100182614	ENSCINP00000017487	ENSCINP00000031080	Uncharacterized protein.	Zinc transporter ZIP11.	0.624
F6XNK4_CIOIN	F6QGV6_CIOIN	ENSCINP00000024877	ENSCINP00000016928	Uncharacterized protein.	Uncharacterized protein.	0.726
F6XNK4_CIOIN	F6X0G2_CIOIN	ENSCINP00000024877	ENSCINP00000017487	Uncharacterized protein.	Uncharacterized protein.	0.585
F6XNK4_CIOIN	F6YYY1_CIOIN	ENSCINP00000024877	ENSCINP00000012252	Uncharacterized protein.	Uncharacterized protein.	0.767