F6WEY7_CIOIN protein (Ciona intestinalis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

F6WEY7_CIOIN

Uncharacterized protein. (2826 aa)

Predicted Functional Partners:

F6RDN9_CIOIN

0.902

F6VEF4_CIOIN

0.900

F6YWW9_CIOIN

0.565

LOC113474034

0.565

pax1/9

0.515

H2XKX6_CIOIN

0.508

snail

0.472

F6Y8V9_CIOIN

0.462

F6Z6J9_CIOIN

0.456

F6QQE0_CIOIN

0.432

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6QQE0_CIOIN	F6VEF4_CIOIN	ENSCINP00000001599	ENSCINP00000001942	Uncharacterized protein.	Uncharacterized protein.	0.432
F6QQE0_CIOIN	F6WEY7_CIOIN	ENSCINP00000001599	ENSCINP00000017499	Uncharacterized protein.	Uncharacterized protein.	0.432
F6RDN9_CIOIN	F6VEF4_CIOIN	ENSCINP00000025481	ENSCINP00000001942	Uncharacterized protein.	Uncharacterized protein.	0.902
F6RDN9_CIOIN	F6WEY7_CIOIN	ENSCINP00000025481	ENSCINP00000017499	Uncharacterized protein.	Uncharacterized protein.	0.902
F6VEF4_CIOIN	F6QQE0_CIOIN	ENSCINP00000001942	ENSCINP00000001599	Uncharacterized protein.	Uncharacterized protein.	0.432
F6VEF4_CIOIN	F6RDN9_CIOIN	ENSCINP00000001942	ENSCINP00000025481	Uncharacterized protein.	Uncharacterized protein.	0.902
F6VEF4_CIOIN	F6WEY7_CIOIN	ENSCINP00000001942	ENSCINP00000017499	Uncharacterized protein.	Uncharacterized protein.	0.900
F6VEF4_CIOIN	F6Y8V9_CIOIN	ENSCINP00000001942	ENSCINP00000019338	Uncharacterized protein.	Uncharacterized protein.	0.462
F6VEF4_CIOIN	F6YWW9_CIOIN	ENSCINP00000001942	ENSCINP00000012580	Uncharacterized protein.	P/Homo B domain-containing protein; Belongs to the peptidase S8 family.	0.565
F6VEF4_CIOIN	F6Z6J9_CIOIN	ENSCINP00000001942	ENSCINP00000016537	Uncharacterized protein.	NTR domain-containing protein.	0.456
F6VEF4_CIOIN	H2XKX6_CIOIN	ENSCINP00000001942	ENSCINP00000030308	Uncharacterized protein.	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.508
F6VEF4_CIOIN	LOC113474034	ENSCINP00000001942	ENSCINP00000012624	Uncharacterized protein.	P/Homo B domain-containing protein; Belongs to the peptidase S8 family.	0.565
F6VEF4_CIOIN	pax1/9	ENSCINP00000001942	ENSCINP00000035689	Uncharacterized protein.	Transcription factor protein.	0.515
F6VEF4_CIOIN	snail	ENSCINP00000001942	ENSCINP00000018113	Uncharacterized protein.	Uncharacterized protein.	0.472
F6WEY7_CIOIN	F6QQE0_CIOIN	ENSCINP00000017499	ENSCINP00000001599	Uncharacterized protein.	Uncharacterized protein.	0.432
F6WEY7_CIOIN	F6RDN9_CIOIN	ENSCINP00000017499	ENSCINP00000025481	Uncharacterized protein.	Uncharacterized protein.	0.902
F6WEY7_CIOIN	F6VEF4_CIOIN	ENSCINP00000017499	ENSCINP00000001942	Uncharacterized protein.	Uncharacterized protein.	0.900
F6WEY7_CIOIN	F6Y8V9_CIOIN	ENSCINP00000017499	ENSCINP00000019338	Uncharacterized protein.	Uncharacterized protein.	0.462
F6WEY7_CIOIN	F6YWW9_CIOIN	ENSCINP00000017499	ENSCINP00000012580	Uncharacterized protein.	P/Homo B domain-containing protein; Belongs to the peptidase S8 family.	0.565
F6WEY7_CIOIN	F6Z6J9_CIOIN	ENSCINP00000017499	ENSCINP00000016537	Uncharacterized protein.	NTR domain-containing protein.	0.456