STRINGSTRING
spag16 protein (Ciona intestinalis) - STRING interaction network
"spag16" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spag16Uncharacterized protein (606 aa)    
Predicted Functional Partners:
pf16
Pf16 protein (425 aa)
     
 
  0.691
ENSCING00000023881
Uncharacterized protein (171 aa)
     
 
  0.674
ENSCING00000001344
Uncharacterized protein (100 aa)
     
 
  0.654
ENSCING00000020611
Uncharacterized protein (377 aa)
           
  0.587
ENSCING00000024929
Importin subunit alpha (527 aa)
     
 
  0.511
ENSCING00000008979
Importin subunit alpha (529 aa)
     
 
  0.511
ENSCING00000008816
Importin subunit alpha (519 aa)
     
 
  0.511
rsp3
Radial spoke 3 protein (322 aa)
     
   
  0.450
ENSCING00000013476
Uncharacterized protein (838 aa)
     
   
  0.443
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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