STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100175483Importin N-terminal domain-containing protein. (1067 aa)    
Predicted Functional Partners:
LOC100180815
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.981
L7N0T0_CIOIN
RanBD1 domain-containing protein.
   
 0.938
F6RMU1_CIOIN
Importin N-terminal domain-containing protein.
   
 
 0.919
LOC100176772
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
 
 
    0.840
H2XVM3_CIOIN
Uncharacterized protein.
   
 0.826
F6TAD8_CIOIN
CBF domain-containing protein.
   
 0.805
H2XUI3_CIOIN
Uncharacterized protein.
   
 0.802
H2XJM9_CIOIN
Uncharacterized protein.
   
 0.799
LOC100182394
Exosome complex component RRP4.
   
 0.797
LOC100184256
Exosome complex component RRP42-like.
   
 0.795
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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