Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
F6TQ55_CIOINDUF2040 domain-containing protein. (415 aa)    
Predicted Functional Partners:
F6VEU2_CIOIN
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
   
 0.982
LOC100182540
Uncharacterized protein.
     
 0.940
F6TYS5_CIOIN
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.925
F6UYA6_CIOIN
Uncharacterized protein.
   
  0.922
F6WAZ5_CIOIN
Uncharacterized protein.
     
  0.922
F6W8G0_CIOIN
WD_REPEATS_REGION domain-containing protein.
     
  0.922
F6YBL5_CIOIN
RRM domain-containing protein.
     
  0.921
F6ZJP7_CIOIN
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.917
F6YUE7_CIOIN
Uncharacterized protein.
   
 0.911
LOC100182155
Uncharacterized protein.
     
  0.910
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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