STRINGSTRING
thbsbi protein (Ciona intestinalis) - STRING interaction network
"thbsbi" - Trhombospondin Bi precursor in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thbsbiTrhombospondin Bi precursor (961 aa)    
Predicted Functional Partners:
ENSCING00000019181
Uncharacterized protein (609 aa)
     
 
  0.627
ENSCING00000005940
Uncharacterized protein (435 aa)
       
  0.621
ENSCING00000018153
Uncharacterized protein (2970 aa)
       
  0.621
ENSCING00000008697
Uncharacterized protein (1020 aa)
     
  0.613
ENSCING00000009362
Integrin beta (827 aa)
     
  0.561
ENSCING00000006316
Integrin beta (828 aa)
     
  0.561
ENSCING00000002989
Integrin beta (710 aa)
     
  0.561
fut13
Fut13 protein precursor (434 aa)
         
  0.554
LOC445590
SPARC precursor (366 aa)
     
  0.552
ENSCING00000008960
Uncharacterized protein (1486 aa)
       
  0.543
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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