Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
F6T1X5_CIOINUncharacterized protein. (508 aa)    
Predicted Functional Partners:
F6UA87_CIOIN
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.944
LOC100176772
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
0.942
F6TIR0_CIOIN
Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.
  
 0.896
F6WNN3_CIOIN
OMPdecase domain-containing protein.
  
 
 0.896
LOC100178002
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
 
 0.880
LOC100183973
Cytochrome b5 isoform X1; Belongs to the cytochrome b5 family.
   
 0.870
LOC100176001
Cytochrome b5 domain-containing protein 1-like; Belongs to the cytochrome b5 family.
   
 0.870
F6ZIP8_CIOIN
NADPH:adrenodoxin oxidoreductase, mitochondrial.
   
 0.778
F6VUM2_CIOIN
Glutamine synthetase.
   
 
 0.771
F6U0I8_CIOIN
Amidohydro-rel domain-containing protein.
  
 
 0.767
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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