F6ZY26_CIOIN protein (Ciona intestinalis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

F6ZY26_CIOIN

Uncharacterized protein. (318 aa)

Predicted Functional Partners:

F6YGK4_CIOIN

0.838

H2Y0A4_CIOIN

0.711

F6U441_CIOIN

0.671

H2XPW5_CIOIN

0.578

LOC100180163

0.576

H2Y281_CIOIN

0.528

H2Y1Y1_CIOIN

0.513

LOC100181727

0.512

F6V326_CIOIN

0.500

LOC100179868

0.489

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6U441_CIOIN	F6ZY26_CIOIN	ENSCINP00000011569	ENSCINP00000017675	Uncharacterized protein.	Uncharacterized protein.	0.671
F6V326_CIOIN	F6ZY26_CIOIN	ENSCINP00000024667	ENSCINP00000017675	PXA domain-containing protein.	Uncharacterized protein.	0.500
F6V326_CIOIN	H2XPW5_CIOIN	ENSCINP00000024667	ENSCINP00000031699	PXA domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.513
F6V326_CIOIN	LOC100181727	ENSCINP00000024667	ENSCINP00000004212	PXA domain-containing protein.	Uncharacterized protein.	0.484
F6YGK4_CIOIN	F6ZY26_CIOIN	ENSCINP00000008726	ENSCINP00000017675	Uncharacterized protein.	Uncharacterized protein.	0.838
F6ZY26_CIOIN	F6U441_CIOIN	ENSCINP00000017675	ENSCINP00000011569	Uncharacterized protein.	Uncharacterized protein.	0.671
F6ZY26_CIOIN	F6V326_CIOIN	ENSCINP00000017675	ENSCINP00000024667	Uncharacterized protein.	PXA domain-containing protein.	0.500
F6ZY26_CIOIN	F6YGK4_CIOIN	ENSCINP00000017675	ENSCINP00000008726	Uncharacterized protein.	Uncharacterized protein.	0.838
F6ZY26_CIOIN	H2XPW5_CIOIN	ENSCINP00000017675	ENSCINP00000031699	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.578
F6ZY26_CIOIN	H2Y0A4_CIOIN	ENSCINP00000017675	ENSCINP00000035338	Uncharacterized protein.	Uncharacterized protein.	0.711
F6ZY26_CIOIN	H2Y1Y1_CIOIN	ENSCINP00000017675	ENSCINP00000035916	Uncharacterized protein.	Uncharacterized protein.	0.513
F6ZY26_CIOIN	H2Y281_CIOIN	ENSCINP00000017675	ENSCINP00000036016	Uncharacterized protein.	Uncharacterized protein.	0.528
F6ZY26_CIOIN	LOC100179868	ENSCINP00000017675	ENSCINP00000015095	Uncharacterized protein.	Uncharacterized protein.	0.489
F6ZY26_CIOIN	LOC100180163	ENSCINP00000017675	ENSCINP00000026473	Uncharacterized protein.	post-GPI attachment to proteins factor 2-like.	0.576
F6ZY26_CIOIN	LOC100181727	ENSCINP00000017675	ENSCINP00000004212	Uncharacterized protein.	Uncharacterized protein.	0.512
H2XPW5_CIOIN	F6V326_CIOIN	ENSCINP00000031699	ENSCINP00000024667	Rab-GAP TBC domain-containing protein.	PXA domain-containing protein.	0.513
H2XPW5_CIOIN	F6ZY26_CIOIN	ENSCINP00000031699	ENSCINP00000017675	Rab-GAP TBC domain-containing protein.	Uncharacterized protein.	0.578
H2XPW5_CIOIN	H2Y281_CIOIN	ENSCINP00000031699	ENSCINP00000036016	Rab-GAP TBC domain-containing protein.	Uncharacterized protein.	0.513
H2XPW5_CIOIN	LOC100179868	ENSCINP00000031699	ENSCINP00000015095	Rab-GAP TBC domain-containing protein.	Uncharacterized protein.	0.439
H2XPW5_CIOIN	LOC100181727	ENSCINP00000031699	ENSCINP00000004212	Rab-GAP TBC domain-containing protein.	Uncharacterized protein.	0.536