STRINGSTRING
cwh43 protein (Ciona intestinalis) - STRING interaction network
"cwh43" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cwh43Uncharacterized protein (318 aa)    
Predicted Functional Partners:
ENSCING00000022050
Uncharacterized protein (159 aa)
 
            0.683
ENSCING00000019940
Uncharacterized protein (980 aa)
     
   
  0.463
ENSCING00000018489
Uncharacterized protein (323 aa)
           
  0.461
ENSCING00000009936
Uncharacterized protein (322 aa)
           
  0.461
ENSCING00000018169
Uncharacterized protein (344 aa)
           
  0.443
lass6
Transcription factor protein (349 aa)
           
  0.443
ENSCING00000007134
Uncharacterized protein (354 aa)
           
  0.443
lag1-like1
Transcription factor protein (382 aa)
           
  0.443
ENSCING00000001483
Uncharacterized protein (335 aa)
           
  0.443
ENSCING00000001480
Uncharacterized protein (338 aa)
           
  0.443
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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