STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6WCV2_CIOINProtein kinase domain-containing protein. (510 aa)    
Predicted Functional Partners:
LOC100176589
DNA helicase; Belongs to the MCM family.
   
 0.993
F7BA18_CIOIN
DNA helicase; Belongs to the MCM family.
   
 0.981
LOC108950147
DNA helicase; Belongs to the MCM family.
   
 0.976
F6RKM9_CIOIN
DNA helicase; Belongs to the MCM family.
   
 0.974
MCM7
DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]
    
 0.968
F6QND3_CIOIN
Mcm10 domain-containing protein.
   
 0.964
F6W6L5_CIOIN
MCM domain-containing protein; Belongs to the MCM family.
   
 0.933
F6W685_CIOIN
Uncharacterized protein.
   
 0.933
F6WMK2_CIOIN
MCM domain-containing protein; Belongs to the MCM family.
   
 0.915
F6WMB2_CIOIN
Uncharacterized protein.
    
 
 0.911
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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