STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7BJ17_CIOIN1-alkyl-2-acetylglycerophosphocholine esterase. (394 aa)    
Predicted Functional Partners:
LOC100180225
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.
     
 0.916
F7B4P3_CIOIN
Uncharacterized protein.
   
 
 0.909
H2XRA8_CIOIN
PlsC domain-containing protein.
     
 0.909
LOC100178157
Platelet-activating factor acetylhydrolase IB subunit beta-like.
     
 0.907
F6Z2A5_CIOIN
Uncharacterized protein.
  
  
 
0.901
H2Y2E8_CIOIN
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.900
F6YVW0_CIOIN
PLA2c domain-containing protein.
     
 0.712
F6Y0W6_CIOIN
Uncharacterized protein.
     
 0.712
F6TT57_CIOIN
Uncharacterized protein.
     
 0.694
F6WQN6_CIOIN
Phospholipase A(2).
     
 0.678
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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